BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013E01SP1|AL426526
(819 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1325 1582 0.0
>3x_Contig1325
Length = 7053
Score = 1582 bits (792), Expect = 0.0
Identities = 807/819 (98%)
Strand = Plus / Minus
Query: 1 atcgtcagtagaatahtcttggagcttgtgagcaggtacaacaaattcataatatcgcca 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4366 atcgtcagtagaatattcttggagcttgtgagcaggtacaacaaattcataatatcgcca 4307
Query: 61 gacccagccttatcattgcttccggaagaaaaacaactggaaatcactttcttgaagcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4306 gacccagccttatcattgcttccggaagaaaaacaactggaaatcactttcttgaagcta 4247
Query: 121 cacaatatagttcttcttgaacaatgtgtgtctgavcttcgcttcaaaccagcatttatt 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4246 cacaatatagttcttcttgaacaatgtgtgtctgaacttcgcttcaaaccagcatttatt 4187
Query: 181 gagttgacatatatttkcaacaaattgagtaactcgacttatccaagtatctttacggaa 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4186 gagttgacatatattttcaacaaattgagtaactcgacttatccaagtatctttacggaa 4127
Query: 241 tccttctcagctctggaagaaacagtcgtgacagtragggaatcaatcattcataggtgg 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 4126 tccttctcagctctggaagaaacagtcgtgacagtaagggaatcaatcattcataggtgg 4067
Query: 301 aagaraatattaavagcctctctcagtccctactttagactcagcaaatgggaggagatt 360
|||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 4066 aagaaaatattaaaagcctctctcagtccctactttagactcagcaaatggcaggagatt 4007
Query: 361 tctaaccctccggctcaatgttcaactgagttgataggcgcgatccagaaatcatccaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4006 tctaaccctccggctcaatgttcaactgagttgataggcgcgatccagaaatcatccaag 3947
Query: 421 cttaaggctgaatttgctctgttaaagttgccaacaaatatttctatttccattttccat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3946 cttaaggctgaatttgctctgttaaagttgccaacaaatatttctatttccattttccat 3887
Query: 481 ggtttacttacgcaatggatattttacttgaragactacgttgtcaaagttaataacttc 540
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 3886 ggtttacttacgcaatggatattttacttgaaagactacgttgtcaaagttaataacttc 3827
Query: 541 tctgaraatggattaavacaagtcatgcttgattatggagagttgaaaactgtattacaa 600
||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3826 tctgaaaatggattaaaacaagtcatgcttgattatggagagttgaaaactgtattacaa 3767
Query: 601 ctagatgatgttccacaatgtgttcaagaagaagaatttgavgagttcatgaaagtctta 660
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 3766 ctagatgatgttccacaatgtgttcaagaagaagaatttgaagagttcatgaaagtctta 3707
Query: 661 agcctaaagtacaacggcaaatctcaagtacttccttttttgagtaaaggatatatgtca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3706 agcctaaagtacaacggcaaatctcaagtacttccttttttgagtaaaggatatatgtca 3647
Query: 721 caatcccaagactatcttgaagtgagagatgcactaggcttaaaatacatttctaactct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3646 caatcccaagactatcttgaagtgagagatgcactaggcttaaaatacatttctaactct 3587
Query: 781 gaattagattatgcattatacaaaattctataaatnatt 819
||||||||||||||||||||||||||||||||||| |||
Sbjct: 3586 gaattagattatgcattatacaaaattctataaataatt 3548
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6164
Number of Sequences: 1807
Number of extensions: 6164
Number of successful extensions: 36
Number of sequences better than 1.0e-20: 1
length of query: 819
length of database: 10,358,551
effective HSP length: 16
effective length of query: 803
effective length of database: 10,329,639
effective search space: 8294700117
effective search space used: 8294700117
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (30.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.4 bits)